Entity Genotype

DescriptionA set of genetic variations found within individuals that can be used to classify the individual's phenotypic characteristics.
The genotype refers to the entire set of genes in a cell, an organism, or an individual. A gene for a particular character or trait may exist in two allelic forms; one is dominant (for example, A) and the other is recessive (for example, a). Based on this, there could be three possible genotypes for a particular character: AA (homozygous dominant), Aa (heterozygous), and aa (homozygous recessive).

Attributes
Genotype Frequency RtGenotype Frequency Rt
Genotype NameGenotype Name
Genotype TxtGenotype Txt
Individual Genotype Population TypeIndividual Genotype Population Type

Dependencies
 NONE

Reverse Dependencies
 

Attribute Details

 Genotype Frequency Rt
DescriptionThe frequency of genotype (a numeric value between 0 and 1) for the specific genotype (for example, SNP/Allele).
The Hardy-Weinberg principle can be illustrated mathematically with the equation:
p2+2pq+q2 = 1
Where ‘p' and ‘q' represent the frequencies of alleles. It is important to note that p added to q always equals one (100%).
Data TypeStandards - Data Domains.ddm/Data Domains/Rate [FLOAT(5)]
Is Part Of PrimaryKeyfalse
Is Requiredfalse
Is Derivedfalse
Is Surrogate Keyfalse



 Genotype Name
DescriptionThe word of phrase used to identify the genotype.

For example:
Homozygous dominant
Homozygous recessive
Heterozygous dominant
Data TypeStandards - Data Domains.ddm/Data Domains/Enumeration [VARCHAR(20)]
Is Part Of PrimaryKeyfalse
Is Requiredfalse
Is Derivedfalse
Is Surrogate Keyfalse



 Genotype Txt
DescriptionThe value assigned to the genotype.

For example:
The value BB or Bb or bb assigned to the genotype
BB and bb [Homozygous]; Bb [Heterozygous]
Data TypeStandards - Data Domains.ddm/Data Domains/Text Very Small [VARCHAR(20)]
Is Part Of PrimaryKeyfalse
Is Requiredfalse
Is Derivedfalse
Is Surrogate Keyfalse



 Individual Genotype Population Type
DescriptionIndicates whether the genotype belongs to a patient who is a subject or a non-subject or population.
Data TypeStandards - Data Domains.ddm/Data Domains/Enumeration [VARCHAR(20)]
Is Part Of PrimaryKeyfalse
Is Requiredfalse
Is Derivedfalse
Is Surrogate Keyfalse